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1<aside class=search-modal id=search><div class=container><section class=search-header><div class="row no-gutters justify-content-between mb-3"><div class=col-6><h1>Search</h1></div><div class="col-6 col-search-close"><a class=js-search href=# aria-label=Close><i class="fas fa-times-circle text-muted" aria-hidden=true></i></a></div></div><div id=search-box><input name=q id=search-query placeholder=Search... autocapitalize=off autocomplete=off autocorrect=off spellcheck=false type=search class=form-control aria-label=Search...></div></section><section class=section-search-results><div id=search-hits></div></section></div></aside><div class="page-header header--fixed"><header><nav class="navbar navbar-expand-lg navbar-light compensate-for-scrollbar" id=navbar-main><div class=container-xl><div class="d-none d-lg-inline-flex"><a class=navbar-brand href=/><img src=/media/logo_hu10807103168474182858.png alt=MicroEcoLab></a></div><button type=button class=navbar-toggler data-toggle=collapse data-target=#navbar-content aria-controls=navbar-content aria-expanded=false aria-label="Toggle navigation"> 2<span><i class="fas fa-bars"></i></span></button><div class="navbar-brand-mobile-wrapper d-inline-flex d-lg-none"><a class=navbar-brand href=/><img src=/media/logo_hu10807103168474182858.png alt=MicroEcoLab></a></div><div class="navbar-collapse main-menu-item collapse justify-content-end" id=navbar-content><ul class="navbar-nav d-md-inline-flex"><li class=nav-item><a class=nav-link href=/post><span>News</span></a></li><li class=nav-item><a class=nav-link href=/people><span>People</span></a></li><li class=nav-item><a class=nav-link href=/project><span>Grants</span></a></li><li class="nav-item dropdown"><a href=# class="nav-link dropdown-toggle" data-toggle=dropdown aria-haspopup=true><span>Our Works</span><span class=caret></span></a><div class=dropdown-menu><a class=dropdown-item href=/chapter data-target=chapter><span>Books</span></a> 3<a class=dropdown-item href=/publication data-target=publication><span>Publications</span></a> 4<a class=dropdown-item href=/patent data-target=patent><span>Patents</span></a> 5<a class=dropdown-item href=/software data-target=software><span>Software & Databases</span></a></div></li><li class=nav-item><a class=nav-link href=/contact><span>Contact</span></a></li></ul></div><ul class="nav-icons navbar-nav flex-row ml-auto d-flex pl-md-2"><li class=nav-item><a class="nav-link js-search" href=# aria-label=Search><i class="fas fa-search" aria-hidden=true></i></a></li><li class="nav-item dropdown theme-dropdown"><a href=# class=nav-link data-toggle=dropdown aria-haspopup=true aria-label="Display preferences"><i class="fas fa-moon" aria-hidden=true></i></a><div class=dropdown-menu><a href=# class="dropdown-item js-set-theme-light"><span>Light</span> 6</a><a href=# class="dropdown-item js-set-theme-dark"><span>Dark</span> 7</a><a href=# class="dropdown-item js-set-theme-auto"><span>Automatic</span></a></div></li></ul></div></nav></header></div><div class=page-body><span class="js-widget-page d-none"></span><section id=section-hero class="home-section wg-hero"><div class=home-section-bg></div><div class=container><h1 class=hero-title><strong>Laboratory of Applied</br>Microbial Ecology</strong></h1><div class=hero-lead>Biomonitoring and Bioprospecting</div></div></section><section id=section-markdown class="home-section wg-markdown"><div class=home-section-bg></div><div class=container><div class="row justify-content-center"><div class=col-12><div class="small text-justify">Our research focuses on extremophilic bacteria, particularly psychrotolerants from Arctic and Antarctic regions, metallotolerants, and strains resistant to toxic compounds (including antibiotics). Using structural and functional genomics, we investigate their metabolic pathways and resistance mechanisms, with an emphasis on whole-genome sequencing and mobile genetic elements (MGEs). We apply advanced computational analyses to explore the ecological and evolutionary roles of MGEs and their biogeography.<br><br>We assess the taxonomic and functional diversity of microbial communities in pristine and anthropogenically-shaped environments, aiming to understand adaptation and seasonal microbiome dynamics. One of the key research areas is the ecological and molecular characterization of antibiotic resistance, supported by our custom-developed bioinformatic tools and curated databases.<br><br>We also conduct biomonitoring studies focused on the detection and analysis of pathogens, antibiotic resistance genes, and virulence factors across diverse environments. These efforts support applications in both human and veterinary medicine, enhancing our understanding of the environmental reservoirs and transmission routes of clinically relevant traits.<br><br>In parallel, we engage in bioprospecting of extreme environments for microbial strains, novel enzymes, and metabolites with high biotechnological potential, including their applications in regenerative agriculture and environmental biotechnologies.</div></div></div></div></section><section id=section-collection class="home-section wg-collection"><div class=home-section-bg></div><div class=container><div class="row justify-content-center"><div class="section-heading col-12 mb-3 text-center"><h1 class=mb-0>Latest Papers</h1></div><div class=col-12><div class="media stream-item view-compact border-bottom pb-3 mb-1"><div class=media-body><div class="section-subheading article-title mb-1 mt-0"><h5 class=mb-0><a href=/publication/2026-wolacewicz-environ-pollut/>The occurrence and removal of antibiotic residues and antibiotic resistance genes in the largest European constructed wetland at Orhei (Moldova)</a></h5></div><div class=small><span class=author-bold><span class=author-highlighted><a href=/author/mikolaj-wolacewicz/>
7Mikolaj Wolacewicz</a></span>, 8<span class=author-highlighted><a href=/author/przemyslaw-decewicz/>Przemyslaw Decewicz</a></span>, 9<span>Maria Eugenia Valdes</span>, 10<span>Oana-Simina Iaconi</span>, 11<span>Mihail Todiras</span>, 12<span>Alina Ferdohleb</span>, 13<span>Sara Rodriguez-Mozaz</span>, 14<span>Carles M. Borrego</span>, 15<span class=author-highlighted><a href=/author/lukasz-dziewit/>Lukasz Dziewit</a></span><div class=pub-publication-details><span class=pub-journal><i>Environmental Pollution</i>, </span><span class=pub-details>402: 128381 </span><span class=pub-year>(2026)</span></div></span></div><div class="btn-links mt-1"><a class="btn btn-outline-primary btn-page-header btn-sm" href=https://doi.org/10.1016/j.envpol.2026.128381 target=_blank rel=noopener><i class="fas fa-link mr-1"></i>DOI</a></div></div><div class=ml-3></div></div><style>.author-bold a{font-weight:700}</style><div class="media stream-item view-compact border-bottom pb-3 mb-1"><div class=media-body><div class="section-subheading article-title mb-1 mt-0"><h5 class=mb-0><a href=/publication/2026-grzesiak-syst-appl-microbiol/><i>Gelidimonas denitrificans</i> gen. nov., sp. nov., and <i>Gelidimonas diazotrophica</i> sp. nov. psychrophilic bacteria involved in the nitrogen cycle in tundra soils of South Spitsbergen</a></h5></div><div class=small><span class=author-bold><span>Jakub Grzesiak</span>, 16<span>Julia Brzykcy</span>, 17<span>Peter Young</span>, 18<span>Elvira Krakowska</span>, 19<span>Robert Stasiuk</span>, 20<span>Kamil Krakowski</span>, 21<span class=author-highlighted><a href=/author/przemyslaw-decewicz/>Przemyslaw Decewicz</a></span>, 22<span>Alina Kiedrynska</span>, 23<span>Renata Matlakowska</span>, 24<span>Dariusz Bartosik</span><div class=pub-publication-details><span class=pub-journal><i>Systematic and Applied Microbiology</i>, </span><span class=pub-details>49: 126730 </span><span class=pub-year>(2026)</span></div></span></div><div class="btn-links mt-1"><a class="btn btn-outline-primary btn-page-header btn-sm" href=https://doi.org/10.1016/j.syapm.2026.126730 target=_blank rel=noopener><i class="fas fa-link mr-1"></i>DOI</a></div></div><div class=ml-3></div></div><style>.author-bold a{font-weight:700}</style><div class="media stream-item view-compact border-bottom pb-3 mb-1"><div class=media-body><div class="section-subheading article-title mb-1 mt-0"><h5 class=mb-0><a href=/publication/2026-skalny-langmuir/>Bacterial biomolecules drive extracellular DNA adsorption onto ferrihydrite: interfacial interactions and spectroscopic insights</a></h5></div><div class=small><span class=author-bold><span>Mateusz Skalny</span>, 25<span>Jakub Czeremuga</span>, 26<span>Maciej Roman</span>, 27<span>Tomasz Wrobel</span>, 28<span class=author-highlighted><a href=/author/lukasz-dziewit/>Lukasz Dziewit</a></span>, 29<span>Tomasz Bajda</span><div class=pub-publication-details><span class=pub-journal><i>Langmuir</i>, </span><span class=pub-details>42, 16131-16144 </span><span class=pub-year>(2026)</span></div></span></div><div class="btn-links mt-1"><a class="btn btn-outline-primary btn-page-header btn-sm" href=https://doi.org/10.1021/acs.langmuir.6c00302 target=_blank rel=noopener><i class="fas fa-link mr-1"></i>DOI</a></div></div><div class=ml-3></div></div><style>.author-bold a{font-weight:700}</style><div class="media stream-item view-compact border-bottom pb-3 mb-1"><div class=media-body><div class="section-subheading article-title mb-1 mt-0"><h5 class=mb-0><a href=/publication/2026-kislo-sci-rep/>Plantâpollinator interactions and floral and nectar traits shape the diversity of the nectar mycobiome</a></h5></div><div class=small><span class=author-bold><span>Kamil Kislo</span>, 30<span>Marcin Mazurkiewicz</span>, 31<span>Bartlomiej Starzynski</span>, 32<span>Marcin Zych</span>, 33<span class=author-highlighted><a href=/author/mikolaj-wolacewicz/>Mikolaj Wolacewicz</a></span>, 34<span>Andrzej Bajguz</span>, 35<span>Magdalena Chmur</span>, 36<span>Katarzyna Roguz</span><div class=pub-publication-details><span class=pub-journal><i>Scientific Reports</i>, </span><span class=pub-details>16: 13253 </span><span class=pub-year>(2026)</span></div></span></div><div class="btn-links mt-1"><a class="btn btn-outline-primary btn-page-header btn-sm" href=https://doi.org/10.1038/s41598-026-42903
36-3 target=_blank rel=noopener><i class="fas fa-link mr-1"></i>DOI</a></div></div><div class=ml-3></div></div><style>.author-bold a{font-weight:700}</style><div class="media stream-item view-compact border-bottom pb-3 mb-1"><div class=media-body><div class="section-subheading article-title mb-1 mt-0"><h5 class=mb-0><a href=/publication/2026-allner-front-plant-sci/>Development of molecular biomarkers for monitoring of arable crops colonization with <i>Methylobacterium symbioticum</i> SB0023/3, a methylotrophic bacterium commonly used as a biostimulant in agriculture</a></h5></div><div class=small><span class=author-bold><span class=author-highlighted><a href=/author/rolf-allner/>Rolf Allner</a></span>, 37<span class=author-highlighted><a href=/author/przemyslaw-decewicz/>Przemyslaw Decewicz</a></span>, 38<span>Thomas Allner</span>, 39<span class=author-highlighted><a href=/author/agata-bluszcz/>Agata Bluszcz</a></span>, 40<span class=author-highlighted><a href=/author/lukasz-dziewit/>Lukasz Dziewit</a></span><div class=pub-publication-details><span class=pub-journal><i>Frontiers in Plant Science</i>, </span><span class=pub-details>17: 1718185 </span><span class=pub-year>(2026)</span></div></span></div><div class="btn-links mt-1"><a class="btn btn-outline-primary btn-page-header btn-sm" href=https://doi.org/10.3389/fpls.2026.1718185 target=_blank rel=noopener><i class="fas fa-link mr-1"></i>DOI</a></div></div><div class=ml-3></div></div><style>.author-bold a{font-weight:700}</style><div class=see-all><a href=/publication-type/research-article/>See all 41<i class="fas fa-angle-right"></i></a></div></div></div></div></section><section id=section-collection class="home-section wg-collection"><div class=home-section-bg></div><div class=container><div class="row justify-content-center"><div class="section-heading col-12 mb-3 text-center"><h1 class=mb-0>Latest News</h1></div><div class=col-12><div class="media stream-item view-compact" style=margin-bottom:15px><div class=media-body><div class="section-subheading article-title mb-0 mt-0"><a href=/post/microecolab-at-edar8-in-brisbane/>MicroEcoLab at EDAR8 in Brisbane</a></div><a href=/post/microecolab-at-edar8-in-brisbane/ class=summary-link><div class=article-style><p>Our PhD Students, Anna Rokowska and Agata Bluszcz, represented our group at the 8th Environmental Dimensions of Antimicrobial Resistance Conference, held in Brisbane, Australia. They presented posters on our research on AMR in freshwater environments, focusing on lakes, rivers, the impact of wastewater treatment plants, and the role of extracellular DNA in the spread of resistance genes.</p><p>The conference was an inspiring opportunity to share our work with the international AMR community, discuss different approaches to studying environmental resistance and get valuable feedback on our projects. It was also a great space for networking, exchanging ideas, and meeting researchers working on similar questions around the world.</p></div></a><div class="stream-meta article-metadata"><div class=article-metadata></div></div></div><div class=ml-3><a href=/post/microecolab-at-edar8-in-brisbane/><img src=/post/microecolab-at-edar8-in-brisbane/1_hu16154059085003786054.webp height=113 width=150 alt="MicroEcoLab at EDAR8 in Brisbane" loading=lazy></a></div></div><div class="media stream-item view-compact" style=margin-bottom:15px><div class=media-body><div class="section-subheading article-title mb-0 mt-0"><a href=/post/przemys%C5%82aw-ironman-decewicz--winner-of-the-full-ironman-competition/>PrzemysÅaw âIronManâ Decewicz â winner of the full Ironman competition!!!</a></div><a href=/post/przemys%C5%82aw-ironman-decewicz--winner-of-the-full-ironman-competition/ class=summary-link><div class=article-style><p>On 26 July 2026, Dr. PrzemysÅaw Decewicz completed a full-distance Ironman race in Kórnik. Przemek swam 3.8 km, cycled 180 km, and ran a full marathon of 42.2 km, crossing the finish line in an outstanding time of 9:43:48.</p><p>And that was not all â he won the race! Even more impressively, this was his first-ever start over the full Ironman distance,making his victory an absolutely remarkable achievement.</p><p>Huge, huge, huge congratulations, Przemek! What an incredible performance!</p></div></a><div class="stream-meta article-metadata"><div class=article-metadata></div></div></div><div class=ml-3><a href=/post/przemys%C5%82aw-ironman-decewicz--winner-of-the-full-ironman-competition/><img src=/post/przemys%C5%82aw-ironman-decewicz--winner-of-the-full-ironman-competition/ironman_hu4368155365059191043.webp height=200 width=150 alt="PrzemysÅaw âIronManâ Decewicz â winner of the full Ironman competition!!!" loading=lazy></a></div></div><div class="media stream-item view-compact" style=margin-bottom:15px><div class=media-body><div class="section-subheading article-title mb-0 mt-0"><a href=/post/stanislaw-swiezewski-the-first-winner-of-the-iglo-award/>Stanislaw Swiezewski, the first winner of the IGLO Award</a></div><a href=/post/stanislaw-swiezewski-the-first-winner-of-the-iglo-award/ class=summary-link><div class=article-style><p>Congrats to Stanislaw Swiezewski, who has become the first winner of the IGLO Award for students actively involved in science communication and promotional activities at the Faculty of Biology, University of Warsaw. Stanislawâscreative project â an igloo built in front of the Faculty building this winter âattracted tremendous attention and went viral online for a long time. The initiative perfectly captured the spirit of the award: originality, engagement, and a fresh approach to promoting the Faculty and its community. Huge congratulations to Stanislaw, and also to Takao Ishikawa, who supported him in bringing this idea to life.</p></div></a><div class="stream-meta article-metadata"><div class=article-metadata></div></div></div><div class=ml-3><a href=/post/stanislaw-swiezewski-the-first-winner-of-the-iglo-award/><img src=/post/stanislaw-swiezewski-the-first-winner-of-the-iglo-award/stach_hu10887448050924711361.webp height=200 width=150 alt="Stanislaw Swiezewski, the first winner of the IGLO Award" loading=lazy></a></div></div><div class="media stream-item view-compact" style=margin-bottom:15px><div class=media-body><div class="section-subheading article-title mb-0 mt-0"><a href=/post/microbial-stories-at-the-science-picnic/>Microbial stories at the Science Picnic</a></div><a href=/post/microbial-stories-at-the-science-picnic/ class=summary-link><div class=article-style><p>On 13 June 2026, our group took part in the Science Picnic of Polish Radio and the Copernicus Science Centre in Warsaw, co-organizing the stand of the Faculty of Biology. This yearâs event gathered many visitors interested in exploring science through hands-on activities, demonstrations, and direct conversations with researchers.</p><p>At our stand, the miniature model of a constructed wetland helped us explain how microorganisms support natural water purification and ecosystem functioning. We also presented agar plates with colorful bacterial cultures, including strains with unusual features that helped us tell stories about microbial diversity and adaptation. One of the highlights was <em>Serratia marcescens</em>, a true queen of science outreach. These examples opened the way to conversations about bacteria living in lakes and other freshwater ec
41osystems, their role in nutrient cycling, and their importance as indicators of environmental change.</p><p>The event was a great opportunity to share topics related to our research projects, including the role of microorganisms in urban water reservoirs, the spread of antibiotic resistance in the environment, and the use of microbial communities in nature-based solutions. We also showed how bacteria and fungi can be useful in agriculture, environmental management, and industry, especially food production. Visitors could test their knowledge in a quiz about microorganisms involved in producing different foods and learn which microbial properties make these processes possible.</p></div></a><div class="stream-meta article-metadata"><div class=article-metadata></div></div></div><div class=ml-3><a href=/post/microbial-stories-at-the-science-picnic/><img src=/post/microbial-stories-at-the-science-picnic/science_picnic_hu12695518892533067923.webp height=110 width=150 alt="Microbial stories at the Science Picnic" loading=lazy></a></div></div><div class="media stream-item view-compact" style=margin-bottom:15px><div class=media-body><div class="section-subheading article-title mb-0 mt-0"><a href=/post/karol-ciuchcinskis-doctoral-graduation/>Karol Ciuchcinskiâs doctoral graduation</a></div><a href=/post/karol-ciuchcinskis-doctoral-graduation/ class=summary-link><div class=article-style><p>Last Saturday, Karol CiuchciÅski took the formal doctoral oath during a graduation ceremony at the University of Warsaw Library. This ceremony marked the official conclusion of his doctoral journey, following his excellent PhD defense in October.</p><p>Karolâs dissertation, entitled <em>âFrom ecological insights to sustainable enzyme discovery and biotechnological innovations â computational analysis of (meta)genomic data from extreme environmentsâ,</em> concluded an ambitious research project carried out in record time. Congratulations, Karol! We wish you every success in your scientific career!</p></div></a><div class="stream-meta article-metadata"><div class=article-metadata></div></div></div><div class=ml-3><a href=/post/karol-ciuchcinskis-doctoral-graduation/><img src=/post/karol-ciuchcinskis-doctoral-graduation/fb_img_1781769805777_hu11803222493301811648.webp height=100 width=150 alt="Karol Ciuchcinskiâs doctoral graduation" loading=lazy></a></div></div><div class=see-all><a href=/post/>See all posts 42<i class="fas fa-angle-right"></i></a></div></div></div></div></section></div><div class=page-footer><div class=container><footer class=site-footer><p class="powered-by copyright-license-text">© 2026 Karol CiuchciÅski. This work is licensed under CC BY NC ND 4.0</p><p class=powered-by></p></footer></div></div>
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Line numbers count LF bytes from the start of the resource, as the search results do. Vendor segments are library code the classifier recognised; they are stored but not indexed. Bytes are shown as Latin1 characters, one per byte.