1 <!DOCTYPE html> 2<html lang="en"> 3 <head> 4 <meta charset="utf-8"> 5 <meta http-equiv="X-UA-Compatible" content="IE=edge"> 6 <meta name="viewport" content="width=device-width, initial-scale=1"> 7 <!-- The above 3 meta tags *must* come first in the head; any other head content must come *after* these tags --> 8 <meta name="description" content="Benchmark Datasets for Bioinformatic Applications"> 9 <meta name="Keywords" content="biobench-sets, Biomolecules, Folding, Disease, Protein, 10 Emidio, Capriotti, Variant, Mutation, Predict, RNA, Structure, Machine Learning, 11 Bioinformatics, University, Bologna, SNP, genome, interpretation"> 12 <meta name="author" content="BioBench Sets - Emidio Capriotti"> 13 <link rel="icon" href="/favicon.ico"> 14 15 <title>ProtDDG-Bench: Benchmarking resource for predictors of protein stability change</title> 16 17 <!-- Bootstrap core CSS --> 18 <link href="../pages/dist/css/bootstrap.min.css" rel="stylesheet"> 19 <!-- IE10 viewport hack for Surface/desktop Windows 8 bug 20 <link href="pages/assets/css/ie10-viewport-bug-workaround.css" rel="stylesheet"> 21 --> 22 23 <!-- Custom styles for this template --> 24 <link href="../pages/style/jumbotron-narrow-biofold.css" rel="stylesheet"> 25 26 <!-- Just for debugging purposes. Don't actually copy these 2 lines! --> 27 <!--[if lt IE 9]>
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28 29 --> 30 31 32 33 </head> 34 35 <body > 36 <br> 37 <div class="container"> 38 39 <div class="jumbotron"> 40 <table width="100%"> 41 <tr> 42 <td width="90%"> 43 <div class='biofold' ><span style="color:#c31e27;"></span><span style="color:#4689a3;">ProtDDG-Bench</span> 44 <p class="subtitle"> 45 <br> 46 Benchmarking resource for predictors of protein stability change 47 <br><br><br> 48 </p> 49 </div> 50 </td> 51 <td width="10%"> 52 <div class="right_cell"> 53 <a href="http://protddg-bench.github.io"> 54 <img src="/pages/img/biobench.png" width="100px" align="left"> 55 </a> 56 </div> 57 </td> 58 </tr> 59 </table> 60 61 <table width="100%"> 62 <tr> 63 <td> 64 <div class="form-inline justify-content-center"> 65 <nav> 66 <ul class="nav nav-pills"> 67 <li role="presentation" ><a href="../index.html">Home</a></li> 68 <li role="presentation" class="active" ><a href="#">VB1432</a></li> 69 <li role="presentation" ><a href="../data/vb1432.csv">CSV</a></li> 70 <li role="presentation" ><a href="../data/vb1432.tsv">TSV</a></li> 71 <li role="presentation" ><a href="../data/vb1432.json">JSON</a></li> 72 <li role="presentation" ><a href="https://github.com/protddg-bench/protddg-bench">GitHub</a></li> 73 </ul> 74 </nav> 75 </div> 76 </td> 77 </tr> 78 </table> 79 <br> 80 <br> 81 <div class="text"> 82 <h4 class="title" >VB1432</h4> 83 </div> 84 <p class="text-small" > 85 VB1432 is composed by 1432 variants from 79 protein structures corresponding to 65 clusters. 86 9 mutations have double experimental data. 1 mutation is not mapping 87 to the strcuture. The 1LRP structure was replace with 1LMB. For structure 1WQ5 88 was considered the chain B. Data from 89 <a href="https://pubmed.ncbi.nlm.nih.gov/29597263" target=blank>PMID:29597263</a>. 90 <br> 91 <br> 92 <br> 93 <p class="text-small" > 94 <div id='table-container'></div> 95 <br> 96 <br> 97 <div class='footer-ok'><div> 98 99 </div> 100 </div> <!-- /container --> 101 102 103 <!-- IE10 viewport hack for Surface/desktop Windows 8 bug 104
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