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2<meta property="og:title" content="Package index"><meta property="og:image" content="https://docs.rpact.org/logo.png"><meta name="keywords" content="rpact, adaptive designs, clinical trials, simulation, analysis, rstats, Shiny, r-project, R package"><link href="reference/figures/favicon.ico" rel="icon"><link href="reference/figures/favicon.ico" rel="apple-touch-icon"><link href="reference/figures/favicon.ico" rel="shortcut icon" type="image/vnd.microsoft.icon"></head><body> 3 <a href="#main" class="visually-hidden-focusable">Skip to contents</a> 4 5 6 <nav class="navbar navbar-expand-lg fixed-top bg-light" data-bs-theme="light" aria-label="Site navigation"><div class="container"> 7 8 <a class="navbar-brand me-2" href="../index.html">rpact</a> 9 10 <small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">4.5.0.9321</small> 11 12 13 <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation"> 14 <span class="navbar-toggler-icon"></span> 15 </button> 16 17 <div id="navbar" class="collapse navbar-collapse ms-3"> 18 <ul class="navbar-nav me-auto"><li class="active nav-item"><a class="nav-link" href="../reference/index.html">Reference</a></li> 19<li class="nav-item dropdown"> 20 <button class="nav-link dropdown-toggle" type="button" id="dropdown-articles" data-bs-toggle="dropdown" aria-expanded="false" aria-haspopup="true">Articles</button> 21 <ul class="dropdown-menu" aria-labelledby="dropdown-articles"><li><a class="dropdown-item" href="../articles/rpact_getting_started.html">Getting started with rpact</a></li> 22 </ul></li> 23<li class="nav-item"><a class="nav-link" href="../news/index.html">Changelog</a></li> 24 </ul><ul class="navbar-nav"><li class="nav-item"><form class="form-inline" role="search"> 25 <input class="form-control" type="search" name="search-input" id="search-input" autocomplete="off" aria-label="Search site" placeholder="Search for" data-search-index="../search.json"></form></li> 26<li class="nav-item"><a class="external-link nav-link" href="https://github.com/rpact-com/rpact/" aria-label="GitHub"><span class="fa fab fa-github fa-lg"></span></a></li> 27 </ul></div> 28 29 30 </div> 31</nav><div class="container template-reference-index"> 32<div class="row"> 33 <main id="main" class="col-md-9"><div class="page-header"> 34 <img src="../logo.png" class="logo" alt=""><h1>Package index</h1> 35 </div> 36 37 <div class="section level2"> 38 <h2 id="all-functions">All functions<a class="anchor" aria-label="anchor" href="#all-functions"></a></h2> 39 40 41 42 <dl></dl></div><div class="section level2"> 43 44 45 46 47 <dl><dt> 48 49 <code><a href="as251Normal.html">as251Normal()</a></code> 50 51 </dt> 52 <dd>
52Algorithm AS 251: Normal Distribution</dd> 53 54 <dt> 55 56 <code><a href="as251StudentT.html">as251StudentT()</a></code> 57 58 </dt> 59 <dd>Algorithm AS 251: Student T Distribution</dd> 60 61 <dt> 62 63 <code><a href="fetch.ParameterSet.html">obtain()</a></code> <code><a href="fetch.ParameterSet.html">fetch()</a></code> 64 65 </dt> 66 <dd>Extract a single parameter</dd> 67 68 <dt> 69 70 <code><a href="getAccrualTime.html">getAccrualTime()</a></code> 71 72 </dt> 73 <dd>Get Accrual Time</dd> 74 75 <dt> 76 77 <code><a href="getAnalysisResults.html">getAnalysisResults()</a></code> 78 79 </dt> 80 <dd>Get Analysis Results</dd> 81 82 <dt> 83 84 <code><a href="getAvailablePlotTypes.html">plotTypes()</a></code> <code><a href="getAvailablePlotTypes.html">getAvailablePlotTypes()</a></code> 85 86 </dt> 87 <dd>Get Available Plot Types</dd> 88 89 <dt> 90 91 <code><a href="getClosedCombinationTestResults.html">getClosedCombinationTestResults()</a></code> 92 93 </dt> 94 <dd>Get Closed Combination Test Results</dd> 95 96 <dt> 97 98 <code><a href="getClosedConditionalDunnettTestResults.html">getClosedConditionalDunnettTestResults()</a></code> 99 100 </dt> 101 <dd>Get Closed Conditional Dunnett Test Results</dd> 102 103 <dt> 104 105 <code><a href="getConditionalError.html">getConditionalError()</a></code> 106 107 </dt> 108 <dd>Calculate the Optimal Conditional Error</dd> 109 110 <dt> 111 112 <code><a href="getConditionalPower.html">getConditionalPower()</a></code> 113 114 </dt> 115 <dd>Get Conditional Power</dd> 116 117 <dt> 118 119 <code><a href="getConditionalRejectionProbabilities.html">getConditionalRejectionProbabilities()</a></code> 120 121 </dt> 122 <dd>Get Conditional Rejection Probabilities</dd> 123 124 <dt> 125 126 <code><a href="getData.html">getData()</a></code> <code><a href="getData.html">getData.SimulationResults()</a></code> 127 128 </dt> 129 <dd>Get Simulation Data</dd> 130 131 <dt> 132 133 <code><a href="getDataset.html">getDataset()</a></code> <code><a href="getDataset.html">getDataSet()</a></code> 134 135 </dt> 136 <dd>Get Dataset</dd> 137 138 <dt> 139 140 <code><a href="getDesignCharacteristics.html">getDesignCharacteristics()</a></code> 141 142 </dt> 143 <dd>Get Design Characteristics</dd> 144 145 <dt> 146 147 <code><a href="getDesignConditionalDunnett.html">getDesignConditionalDunnett()</a></code> 148 149 </dt> 150 <dd>Get Design Conditional Dunnett Test</dd> 151 152 <dt> 153 154 <code><a href="getDesignFisher.html">getDesignFisher()</a></code> 155 156 </dt> 157 <dd>Get Design Fisher</dd> 158 159 <dt> 160 161 <code><a href="getDesignFixed.html">getDesignFixed()</a></code> 162 163 </dt> 164 <dd>Get Fixed Design</dd> 165 166 <dt> 167 168 <code><a href="getDesignGroupSequential.html">getDesignGroupSequential()</a></code> 169 170 </dt> 171 <dd>Get Design Group Sequential</dd> 172 173 <dt> 174 175 <code><a href="getDesignInverseNormal.html">getDesignInverseNormal()</a></code> 176 177 </dt> 178 <dd>
178Get Design Inverse Normal</dd> 179 180 <dt> 181 182 <code><a href="getDesignOptimalConditionalError.html">getDesignOptimalConditionalError()</a></code> 183 184 </dt> 185 <dd>Create an Optimal Conditional Error Design</dd> 186 187 <dt> 188 189 <code><a href="getDesignSet.html">getDesignSet()</a></code> 190 191 </dt> 192 <dd>Get Design Set</dd> 193 194 <dt> 195 196 <code><a href="getEventProbabilities.html">getEventProbabilities()</a></code> 197 198 </dt> 199 <dd>Get Event Probabilities</dd> 200 201 <dt> 202 203 <code><a href="getFinalConfidenceInterval.html">getFinalConfidenceInterval()</a></code> 204 205 </dt> 206 <dd>Get Final Confidence Interval</dd> 207 208 <dt> 209 210 <code><a href="getFinalPValue.html">getFinalPValue()</a></code> 211 212 </dt> 213 <dd>Get Final P Value</dd> 214 215 <dt> 216 217 <code><a href="getFisherInformation.html">getFisherInformation()</a></code> 218 219 </dt> 220 <dd>Get Fisher Information From a Design Plan or Simulation Results</dd> 221 222 <dt> 223 224 <code><a href="getFutilityBounds.html">getFutilityBounds()</a></code> 225 226 </dt> 227 <dd>Get Futility Bounds</dd> 228 229 <dt> 230 231 <code><a href="getGroupSequentialProbabilities.html">getGroupSequentialProbabilities()</a></code> 232 233 </dt> 234 <dd>Get Group Sequential Probabilities</dd> 235 236 <dt> 237 238 <code><a href="getNumberOfSubjects.html">getNumberOfSubjects()</a></code> 239 240 </dt> 241 <dd>Get Number Of Subjects</dd> 242 243 <dt> 244 245 <code><a href="getObjectRCode.html">rcmd()</a></code> <code><a href="getObjectRCode.html">getObjectRCode()</a></code> 246 247 </dt> 248 <dd>Get Object R Code</dd> 249 250 <dt> 251 252 <code><a href="getObservedInformationRates.html">getObservedInformationRates()</a></code> 253 254 </dt> 255 <dd>Get Observed Information Rates</dd> 256 257 <dt> 258 259 <code><a href="getOutputFormat.html">getOutputFormat()</a></code> 260 261 </dt> 262 <dd>Get Output Format</dd> 263 264 <dt> 265 266 <code><a href="getPerformanceScore.html">getPerformanceScore()</a></code> 267 268 </dt> 269 <dd>Get Performance Score</dd> 270 271 <dt> 272 273 <code><a href="getPiecewiseSurvivalTime.html">getPiecewiseSurvivalTime()</a></code> 274 275 </dt> 276 <dd>Get Piecewise Survival Time</dd> 277 278 <dt> 279 280 <code><a href="getPowerAndAverageSampleNumber.html">getPowerAndAverageSampleNumber()</a></code> 281 282 </dt> 283 <dd>Get Power And Average Sample Number</dd> 284 285 <dt> 286 287 <code><a href="getPowerCounts.html">getPowerCounts()</a></code> 288 289 </dt> 290 <dd>Get Power Counts</dd> 291 292 <dt> 293 294 <code><a href="getPowerMeans.html">getPowerMeans()</a></code> 295 296 </dt> 297 <dd>Get Power Means</dd> 298 299 <dt> 300 301 <code><a href="getPowerRates.html">getPowerRates()</a></code> 302 303 </dt> 304 <dd>Get Power Rates</dd> 305 306 <dt> 307 308 <code><a href="getPowerSurvival.html">getPowerSurvival()</a></code> 309 310 </dt> 311 <dd>Get Power Survival</dd> 312 313 <dt> 314 315 <code><a href="getRawData.html">getRawData()</a></code> 316 317 </dt> 318 <dd>Get Simulation Raw Data for Survival</dd> 319 320 <dt> 321 322 <code><a href="getRepeatedConfidenceIntervals.html">getRepeatedConfidenceIntervals()</a></code> 323 324 </dt> 325 <dd>Get Repeated Confidence Intervals</dd> 326 327 <dt> 328 329 <code><a href="getRepeatedPValues.html">getRepeatedPValues()</a></code> 330 331 </dt> 332 <dd>Get Repeated P Values</dd> 333 334 <dt> 335 336 <code><a href="getSampleSizeCounts.html">getSampleSizeCounts()</a></code> 337 338 </dt> 339 <dd>Get Sample Size Counts</dd> 340 341 <dt> 342 343 <code><a href="getSampleSizeMeans.html">getSampleSizeMeans()</a></code> 344 345 </dt> 346 <dd>Get Sample Size Means</dd> 347 348 <dt> 349 350 <code><a href="getSampleSizeRates.html">getSampleSizeRates()</a></code> 351 352 </dt> 353 <dd>Get Sample Size Rates</dd> 354 355 <dt> 356 357 <code><a href="getSampleSizeSurvival.html">getSampleSizeSurvival()</a></code> 358 359 </dt> 360 <dd>Get Sample Size Survival</dd> 361 362 <dt> 363 364 <code><a href="getSimulationCounts.html">getSimulationCounts()</a></code> 365 366 </dt> 367 <dd>Get Simulation Counts</dd> 368 369 <dt> 370 371 <code><a href="getSimulationEnrichmentMeans.html">getSimulationEnrichmentMeans()</a></code> 372 373 </dt> 374 <dd>Get Simulation Enrichment Means</dd> 375 376 <dt> 377 378 <code><a href="getSimulationEnrichmentRates.html">getSimulationEnrichmentRates()</a></code> 379 380 </dt> 381 <dd>Get Simulation Enrichment Rates</dd> 382 383 <dt> 384 385 <code><a href="getSimulationEnrichmentSurvival.html">getSimulationEnrichmentSurvival()</a></code> 386 387 </dt> 388 <dd>Get Simulation Enrichment Survival</dd> 389 390 <dt> 391 392 <code><a href="getSimulationMeans.html">getSimulationMeans()</a></code> 393 394 </dt> 395 <dd>Get Simulation Means</dd> 396 397 <dt> 398 399 <code><a href="getSimulationMultiArmMeans.html">getSimulationMultiArmMeans()</a></code> 400 401 </dt> 402 <dd>Get Simulation Multi-Arm Means</dd> 403 404 <dt> 405 406 <code><a href="getSimulationMultiArmRates.html">getSimulationMultiArmRates()</a></code> 407 408 </dt> 409 <dd>Get Simulation Multi-Arm Rates</dd> 410 411 <dt> 412 413 <code><a href="getSimulationMultiArmSurvival.html">getSimulationMultiArmSurvival()</a></code> 414 415 </dt> 416 <dd>Get Simulation Multi-Arm Survival</dd> 417 418 <dt> 419 420 <code><a href="getSimulationRates.html">getSimulationRates()</a></code> 421 422 </dt> 423 <dd>Get Simulation Rates</dd> 424 425 <dt> 426 427 <code><a href="getSimulationSurvival.html">getSimulationSurvival()</a></code> 428 429 </dt> 430 <dd>Get Simulation Survival</dd> 431 432 <dt> 433 434 <code><a href="getStageInformation.html">getStageInformation()</a></code> 435 436 </dt> 437 <dd>Calculate Stage Information for an Adaptive Design</dd> 438 439 <dt> 440 441 <code><a href="getStageResults.html">getStageResults()</a></code> 442 443 </dt> 444 <dd>Get Stage Results</dd> 445 446 <dt> 447 448 <code><a href="getTestActions.html">getTestActions()</a></code> 449 450 </dt> 451 <dd>Get Test Actions</dd> 452 453 <dt> 454 455 <code><a href="knit_print.SummaryFactory.html">knit_print(<i><SummaryFactory></i>)</a></code> 456 457 </dt> 458 <dd>Print Summary Factory in Markdown Code Chunks</dd> 459 460 <dt> 461 462 <code><a href="mvnprd.html">mvnprd()</a></code> 463 464 </dt> 465 <dd>
465Original Algorithm AS 251: Normal Distribution</dd> 466 467 <dt> 468 469 <code><a href="mvstud.html">mvstud()</a></code> 470 471 </dt> 472 <dd>Original Algorithm AS 251: Student T Distribution</dd> 473 474 <dt> 475 476 <code><a href="plot.AnalysisResults.html">plot(<i><AnalysisResults></i>)</a></code> 477 478 </dt> 479 <dd>Analysis Results Plotting</dd> 480 481 <dt> 482 483 <code><a href="plot.Dataset.html">plot(<i><Dataset></i>)</a></code> 484 485 </dt> 486 <dd>Dataset Plotting</dd> 487 488 <dt> 489 490 <code><a href="plot.EventProbabilities.html">plot(<i><EventProbabilities></i>)</a></code> 491 492 </dt> 493 <dd>Event Probabilities Plotting</dd> 494 495 <dt> 496 497 <code><a href="plot.NumberOfSubjects.html">plot(<i><NumberOfSubjects></i>)</a></code> 498 499 </dt> 500 <dd>Number Of Subjects Plotting</dd> 501 502 <dt> 503 504 <code><a href="plot.ParameterSet.html">plot(<i><ParameterSet></i>)</a></code> 505 506 </dt> 507 <dd>Parameter Set Plotting</dd> 508 509 <dt> 510 511 <code><a href="plot.SimulationResults.html">plot(<i><SimulationResults></i>)</a></code> 512 513 </dt> 514 <dd>Simulation Results Plotting</dd> 515 516 <dt> 517 518 <code><a href="plot.StageResults.html">plot(<i><StageResults></i>)</a></code> 519 520 </dt> 521 <dd>Stage Results Plotting</dd> 522 523 <dt> 524 525 <code><a href="plot.SummaryFactory.html">plot(<i><SummaryFactory></i>)</a></code> 526 527 </dt> 528 <dd>Summary Factory Plotting</dd> 529 530 <dt> 531 532 <code><a href="plot.TrialDesign.html">plot(<i><TrialDesign></i>)</a></code> <code><a href="plot.TrialDesign.html">plot(<i><TrialDesignCharacteristics></i>)</a></code> 533 534 </dt> 535 <dd>Trial Design Plotting</dd> 536 537 <dt> 538 539 <code><a href="plot.TrialDesignOptimalConditionalError.html">plot(<i><TrialDesignOptimalConditionalError></i>)</a></code> 540 541 </dt> 542 <dd>Plot the optimal conditional error function</dd> 543 544 <dt> 545 546 <code><a href="plot.TrialDesignPlan.html">plot(<i><TrialDesignPlan></i>)</a></code> 547 548 </dt> 549 <dd>Trial Design Plan Plotting</dd> 550 551 <dt> 552 553 <code><a href="plot.TrialDesignSet.html">plot(<i><TrialDesignSet></i>)</a></code> 554 555 </dt> 556 <dd>Trial Design Set Plotting</dd> 557 558 <dt> 559 560 <code><a href="plot.TrialDesignSummaries.html">plot(<i><TrialDesignSummaries></i>)</a></code> 561 562 </dt> 563 <dd>Plot Trial Design Summaries</dd> 564 565 <dt> 566 567 <code><a href="print.SummaryFactory.html">print(<i><SummaryFactory></i>)</a></code> 568 569 </dt> 570 <dd>Summary Factory Printing</dd> 571 572 <dt> 573 574 <code><a href="print.TrialDesignCharacteristics.html">print(<i><TrialDesignCharacteristics></i>)</a></code> 575 576 </dt> 577 <dd>Trial Design Characteristics Printing</dd> 578 579 <dt> 580 581 <code><a href="print.TrialDesignOptimalConditionalError.html">print(<i><TrialDesignOptimalConditionalError></i>)</a></code> 582 583 </dt> 584 <dd>Print optimal conditional error trial design</dd> 585 586 <dt> 587 588 <code><a href="print.TrialDesignSummaries.html">print(<i><TrialDesignSummaries></i>)</a></code> 589 590 </dt> 591 <dd>Print Trial Design Summaries</dd> 592 593 <dt> 594 595 <code><a href="readDataset.html">readDataset()</a></code> 596 597 </dt> 598 <dd>Read Dataset</dd> 599 600 <dt> 601 602 <code><a href="readDatasets.html">readDatasets()</a></code> 603 604 </dt> 605 <dd>Read Multiple Datasets</dd> 606 607 <dt> 608 609 <code><a href="rpact.html">rpact-package</a></code> <code><a href="rpact.html">rpact</a></code> 610 611 </dt> 612 <dd>rpact - Confirmatory Adaptive Clinical Trial Design and Analysis</dd> 613 614 <dt> 615 616 <code><a href="setOutputFormat.html">setOutputFormat()</a></code> 617 618 </dt> 619 <dd>Set Output Format</dd> 620 621 <dt> 622 623 <code><a href="summary.TrialDesignOptimalConditionalError.html">summary(<i><TrialDesignOptimalConditionalError></i>)</a></code> 624 625 </dt> 626 <dd>Summary of the optimal conditional error trial design</dd> 627 628 <dt> 629 630 <code><a href="testPackage.html">testPackage()</a></code> 631 632 </dt> 633 <dd>Test and Validate the rpact Package Installation</dd> 634 635 <dt> 636 637 <code><a href="utilitiesForPiecewiseExponentialDistribution.html">getPiecewiseExponentialDistribution()</a></code> <code><a href="utilitiesForPiecewiseExponentialDistribution.html">ppwexp()</a></code> <code><a href="utilitiesForPiecewiseExponentialDistribution.html">getPiecewiseExponentialQuantile()</a></code> <code><a href="utilitiesForPiecewiseExponentialDistribution.html">qpwexp()</a></code> <code><a href="utilitiesForPiecewiseExponentialDistribution.html">getPiecewiseExponentialRandomNumbers()</a></code> <code><a href="utilitiesForPiecewiseExponentialDistribution.html">rpwexp()</a></code> 638 639 </dt> 640 <dd>The Piecewise Exponential Distribution</dd> 641 642 <dt> 643 644 <code><a href="writeDataset.html">writeDataset()</a></code> 645 646 </dt> 647 <dd>Write Dataset</dd> 648 649 <dt> 650 651 <code><a href="writeDatasets.html">writeDatasets()</a></code> 652 653 </dt> 654 <dd>Write Multiple Datasets</dd> 655 </dl></div> 656 </main></div> 657 658 659 <footer><div class="pkgdown-footer-left"> 660 <p>Developed by Gernot Wassmer, Friedrich Pahlke, RPACT GmbH.</p> 661</div> 662 663<div class="pkgdown-footer-right"> 664 <p>Site built with <a href="https://pkgdown.r-lib.org/" class="external-link">pkgdown</a> 2.2.1.</p> 665</div> 666 667 </footer></div> 668 669 670 671 672 673 </body></html> 674
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